Comparison of sequencing methods and data processing pipelines for whole genome sequencing and minority single nucleotide variant (mSNV) analysis during an influenza A/H5N8 outbreak

Authors:

Poen Marjolein J., Zhang Ming, Pohlmann Anne, Amid Clara, Bestebroer Theo M., Brookes Sharon M., Brown Ian H., Everett Helen, Schapendonk Claudia M. E., Scheuer Rachel D., Smits Saskia L., Beer Martin, Fouchier Ron A. M., Ellis Richard J.

Journal:

PLoS ONE

Date of publication:

Thursday, 20 February, 2020

Volume:

Issue:

Pages:

e0229326

EVAg connections:

Research funded by EVAg

Published by EVAg partner

EVAg

Comparison of sequencing methods and data processing pipelines for whole genome sequencing and minority single nucleotide variant (mSNV) analysis during an influenza A/H5N8 outbreak

EVAg Hotline

For tropical and RG4 viruses

For other human viruses of medical importance

For veterinary pathogens of economic importance

Scientific Publication:

Comparison of sequencing methods and data processing pipelines for whole genome sequencing and minority single nucleotide variant (mSNV) analysis during an influenza A/H5N8 outbreak